STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEGFCVascular endothelial growth factor C. (414 aa)    
Predicted Functional Partners:
FLT4
Fms related tyrosine kinase 4.
    
 0.993
KDR
Kinase insert domain receptor.
    
 0.968
PDGFC
Platelet derived growth factor C.
     
 0.956
HGF
Hepatocyte growth factor.
     
 0.942
EGF
Epidermal growth factor.
     
 0.941
PDGFB
Platelet derived growth factor subunit B.
     
 0.941
LOC109313679
Vascular endothelial growth factor receptor kdr-like.
    
 0.938
FLT1
Fms related tyrosine kinase 1.
    
 0.938
PDGFD
Platelet derived growth factor D.
     
 0.932
PGF
Placental growth factor.
     
0.931
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.