STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPV1Transient receptor potential cation channel subfamily V member 1. (849 aa)    
Predicted Functional Partners:
ENSCPRP00005006822
annotation not available
     
 0.915
ENSCPRP00005006967
annotation not available
     
 0.915
ENSCPRP00005006990
annotation not available
     
 0.822
TRPM8
Transient receptor potential cation channel subfamily M member 8.
     
 0.732
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.731
TRPC5
Transient receptor potential cation channel subfamily C member 5.
     
0.724
PRKCB
Protein kinase C beta.
    
 0.709
TRPM5
Transient receptor potential cation channel subfamily M member 5.
     
 0.670
CALM1
Calmodulin 1.
    
 
 0.640
CALM2
Calmodulin 2.
    
 
 0.640
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.