STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPRP00005018890annotation not available (82 aa)    
Predicted Functional Partners:
ENSCPRP00005019431
annotation not available
    
  0.731
BARD1
BRCA1 associated RING domain 1.
    
  0.546
NME8
NME/NM23 family member 8.
    
 0.539
KDM6A
Lysine demethylase 6A.
    
 0.529
ENSCPRP00005002432
annotation not available
    
  0.526
ENSCPRP00005002438
annotation not available
    
  0.526
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.519
MRPS15
Mitochondrial ribosomal protein S15.
   
  0.518
MRPS9
Mitochondrial ribosomal protein S9.
    
  0.518
MRPS6
Mitochondrial ribosomal protein S6.
    
  0.518
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.