STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDT9Nudix hydrolase 9. (364 aa)    
Predicted Functional Partners:
NUDT5
Nudix hydrolase 5.
    
 0.960
PRPS1
Phosphoribosyl pyrophosphate synthetase 1.
     
 0.920
SPARCL1
SPARC like 1.
      
 0.840
ENSCPRP00005006822
annotation not available
 
   
 0.821
ENSCPRP00005006967
annotation not available
 
   
 0.743
ENSCPRP00005023232
annotation not available
 
   
 0.700
IBSP
Integrin binding sialoprotein.
      
 0.689
NUDT14
Nudix hydrolase 14.
    
 0.682
NUDT2
Nudix hydrolase 2.
    
 0.600
TRPM5
Transient receptor potential cation channel subfamily M member 5.
 
   
 0.579
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.