STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC22CWC22 spliceosome associated protein homolog. (907 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.999
SLU7
SLU7 homolog, splicing factor.
   
 0.998
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
 0.998
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.998
CDC5L
Cell division cycle 5 like.
   
 
 0.995
DHX38
DEAH-box helicase 38.
   
 0.995
BUD31
BUD31 homolog.
   
 
 0.995
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.994
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.994
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
  0.993
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.