STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP50Ubiquitin specific peptidase 50. (357 aa)    
Predicted Functional Partners:
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.675
MRPS9
Mitochondrial ribosomal protein S9.
   
 
 0.659
PCNA
Proliferating cell nuclear antigen.
   
  0.658
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.654
MRPS16
Mitochondrial ribosomal protein S16.
   
 
 0.650
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.648
MRPS14
Mitochondrial ribosomal protein S14.
    
 
 0.643
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.625
MRPL24
Mitochondrial ribosomal protein L24.
    
 
 0.618
MRPL20
Mitochondrial ribosomal protein L20.
   
   0.615
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.