STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP55Centrosomal protein 55. (461 aa)    
Predicted Functional Partners:
DLGAP5
DLG associated protein 5.
   
  
 0.974
KIF11
Kinesin family member 11.
   
  
 0.964
TSG101
Tumor susceptibility 101.
    
 
 0.916
KIF23
Kinesin family member 23.
   
 
 0.900
PDCD6IP
Programmed cell death 6 interacting protein.
    
 
 0.879
CENPF
Centromere protein F.
   
  
 0.878
ECT2
Epithelial cell transforming 2.
   
 
 0.871
CDK1
Cyclin dependent kinase 1.
   
  
 0.863
ASPM
Abnormal spindle microtubule assembly.
   
  
 0.861
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.857
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.