Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATA3 | LDB1 | ENSCPRP00005001415 | ENSCPRP00005018881 | GATA binding protein 3. | LIM domain binding 1. | 0.626 |
GATA3 | LDB2 | ENSCPRP00005001415 | ENSCPRP00005006172 | GATA binding protein 3. | LIM domain binding 2. | 0.626 |
GATA3 | TCF24 | ENSCPRP00005001415 | ENSCPRP00005025538 | GATA binding protein 3. | Transcription factor 24. | 0.422 |
GATA3 | TRPS1 | ENSCPRP00005001415 | ENSCPRP00005010315 | GATA binding protein 3. | Transcriptional repressor GATA binding 1. | 0.452 |
GATA4 | LDB1 | ENSCPRP00005003209 | ENSCPRP00005018881 | GATA binding protein 4. | LIM domain binding 1. | 0.626 |
GATA4 | LDB2 | ENSCPRP00005003209 | ENSCPRP00005006172 | GATA binding protein 4. | LIM domain binding 2. | 0.626 |
GATA4 | TCF24 | ENSCPRP00005003209 | ENSCPRP00005025538 | GATA binding protein 4. | Transcription factor 24. | 0.422 |
GATA4 | TRPS1 | ENSCPRP00005003209 | ENSCPRP00005010315 | GATA binding protein 4. | Transcriptional repressor GATA binding 1. | 0.452 |
GATA5 | LDB1 | ENSCPRP00005007955 | ENSCPRP00005018881 | GATA binding protein 5. | LIM domain binding 1. | 0.626 |
GATA5 | LDB2 | ENSCPRP00005007955 | ENSCPRP00005006172 | GATA binding protein 5. | LIM domain binding 2. | 0.626 |
GATA5 | TCF24 | ENSCPRP00005007955 | ENSCPRP00005025538 | GATA binding protein 5. | Transcription factor 24. | 0.422 |
GATA5 | TRPS1 | ENSCPRP00005007955 | ENSCPRP00005010315 | GATA binding protein 5. | Transcriptional repressor GATA binding 1. | 0.452 |
GATA6 | LDB1 | ENSCPRP00005020423 | ENSCPRP00005018881 | GATA binding protein 6. | LIM domain binding 1. | 0.640 |
GATA6 | LDB2 | ENSCPRP00005020423 | ENSCPRP00005006172 | GATA binding protein 6. | LIM domain binding 2. | 0.640 |
GATA6 | TCF24 | ENSCPRP00005020423 | ENSCPRP00005025538 | GATA binding protein 6. | Transcription factor 24. | 0.422 |
GATA6 | TRPS1 | ENSCPRP00005020423 | ENSCPRP00005010315 | GATA binding protein 6. | Transcriptional repressor GATA binding 1. | 0.452 |
LDB1 | GATA3 | ENSCPRP00005018881 | ENSCPRP00005001415 | LIM domain binding 1. | GATA binding protein 3. | 0.626 |
LDB1 | GATA4 | ENSCPRP00005018881 | ENSCPRP00005003209 | LIM domain binding 1. | GATA binding protein 4. | 0.626 |
LDB1 | GATA5 | ENSCPRP00005018881 | ENSCPRP00005007955 | LIM domain binding 1. | GATA binding protein 5. | 0.626 |
LDB1 | GATA6 | ENSCPRP00005018881 | ENSCPRP00005020423 | LIM domain binding 1. | GATA binding protein 6. | 0.640 |
page 1 of 4