STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPPIntracisternal A particle-promoted polypeptide. (560 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.906
NANP
N-acetylneuraminic acid phosphatase.
    
 
 0.741
RSPH3
Radial spoke head 3.
   
   0.723
MAD2L2
Mitotic arrest deficient 2 like 2.
    
   0.722
CUL1
Cullin 1.
    
 0.708
RBX1
Ring-box 1.
    
 0.697
DVL1
Dishevelled segment polarity protein 1.
    
  0.681
DVL3
Dishevelled segment polarity protein 3.
    
  0.681
UBXN7
UBX domain protein 7.
    
  0.645
BBS9
Bardet-Biedl syndrome 9.
    
 0.637
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.