STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP400E1A binding protein p400. (3002 aa)    
Predicted Functional Partners:
RUVBL2
RuvB like AAA ATPase 2.
    
 0.997
RUVBL1
RuvB like AAA ATPase 1.
    
 0.997
ACTL6A
Actin like 6A.
    
 0.990
ACTR6
Actin related protein 6.
    
 
 0.988
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.987
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.985
YEATS4
YEATS domain containing 4.
    
 0.981
H2AZ2
Histone H2A.V.
    
 0.957
H2AZ1
Histone H2A.Z.
    
 0.957
TRRAP
Transformation/transcription domain associated protein.
   
 0.954
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.