STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPRP00005027535annotation not available (161 aa)    
Predicted Functional Partners:
ENSCPRP00005000737
annotation not available
   
 0.999
NOP56
NOP56 ribonucleoprotein.
   
 0.998
NOP58
NOP58 ribonucleoprotein.
   
 0.996
UTP15
UTP15 small subunit processome component.
   
 0.995
RPS6
Ribosomal protein S6.
  
 0.991
RPS24
Ribosomal protein S24.
  
 0.989
RPS3A
Ribosomal protein S3A.
   
 0.988
RPS8
Ribosomal protein S8.
   
 0.988
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
  
 0.986
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.985
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.