STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09279Chromobox protein 8. (288 aa)    
Predicted Functional Partners:
N302_03578
E3 ubiquitin-protein ligase RING2.
    
 0.990
N302_03946
Polycomb complex protein BMI-1.
    
 0.986
N302_09280
E3 SUMO-protein ligase CBX4.
  
 
 0.954
N302_05531
Polyhomeotic-like 2.
    
 0.904
N302_10765
Polyhomeotic-like 1.
    
 0.904
N302_11017
Polycomb protein SCMH1.
    
 0.877
N302_01132
Sex comb on midleg-like 2.
    
 0.877
N302_15919
Protein AF-9.
   
 
 0.859
N302_10796
Polycomb protein EED.
    
 0.843
N302_10762
Alpha-2-macroglobulin-like 1.
    
 0.826
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.