STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_01171Reverse transcriptase domain-containing protein. (244 aa)    
Predicted Functional Partners:
N302_06543
Fanconi anemia group M protein.
    
  0.828
N302_14240
GDH/6PGL endoplasmic bifunctional protein.
     
 0.576
N302_01778
Protein lin-52.
    
 0.546
N302_06107
Protein lin-54.
    
 0.530
N302_00806
Protein lin-9.
    
 0.507
N302_11023
Replication protein A 32 kDa subunit.
    
 0.479
N302_03847
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
    
 0.479
N302_01141
Histone-binding protein RBBP7.
    
 0.472
N302_07647
WSC domain-containing protein 1.
    
  0.472
N302_13972
Histone-binding protein RBBP4.
    
 0.472
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.