STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09519Chloride channel protein. (731 aa)    
Predicted Functional Partners:
N302_02744
Osteopetrosis-associated transmembrane protein 1.
    
 0.777
N302_00720
Tyrosine-protein phosphatase non-receptor type 14.
    
 
 0.635
N302_09606
Non-specific serine/threonine protein kinase.
    
 0.614
N302_02904
Serine/threonine-protein kinase LATS1.
    
 0.614
N302_09505
Inositol polyphosphate 5-phosphatase OCRL-1.
   
  
 0.512
N302_11503
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.497
N302_01934
Intersectin-2.
      
 0.487
N302_12419
Transmembrane protein 9B.
    
 
 0.478
N302_07525
ADK_lid domain-containing protein; Belongs to the adenylate kinase family.
    
  0.472
N302_04784
ADK_lid domain-containing protein; Belongs to the adenylate kinase family.
    
  0.472
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.