STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_00198Zinc fingers and homeoboxes protein 3. (790 aa)    
Predicted Functional Partners:
N302_11144
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.791
N302_07750
Mitochondrial import inner membrane translocase subunit Tim22.
    
 0.785
N302_04231
CDGSH iron-sulfur domain-containing protein 2.
    
 0.785
N302_06473
Mitochondrial import inner membrane translocase subunit Tim9.
   
 
 0.755
N302_07477
TBC1 domain family member 31.
 
    
 0.600
N302_00194
Putative ATP-dependent RNA helicase DHX35.
    
 
 0.554
N302_14747
Nuclear transcription factor Y subunit alpha.
    
 
 0.547
N302_03284
Sphingosine kinase 1.
    
 0.513
N302_14123
Gamma-glutamyltransferase 7.
      
 0.508
N302_14122
Uncharacterized protein C20orf24.
      
 0.501
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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