STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_13462Retinol-binding protein 3. (1234 aa)    
Predicted Functional Partners:
N302_01011
Clusterin; Belongs to the clusterin family.
   
  
 0.931
N302_15532
Interphotoreceptor matrix proteoglycan 1.
   
  
 0.571
N302_14740
Rhodopsin.
   
  
 0.539
N302_16155
Rhodopsin.
   
  
 0.539
N302_07400
RPE-retinal G protein-coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
   
  
 0.515
N302_04247
Dickkopf-related protein 2.
      
 0.497
N302_02130
Visinin.
   
 
 0.453
N302_13463
Dorsalin-1.
 
      0.434
N302_04844
Ultraviolet-sensitive opsin.
   
  
 0.434
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.