STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_02166Glucosylceramidase. (147 aa)    
Predicted Functional Partners:
N302_16066
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
 0.954
N302_02164
Glucosylceramidase.
 
     0.949
N302_15733
Ceramide glucosyltransferase.
     
 0.942
N302_00052
Galactocerebrosidase.
     
 0.941
N302_04137
Acid ceramidase.
   
 
 0.939
N302_13328
Beta-1,4-galactosyltransferase 6.
     
 0.929
N302_15916
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.929
N302_05616
Lipid phosphate phosphohydrolase 2.
     
 0.929
N302_05581
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.928
N302_15938
Ceramide synthase 5.
     
 0.927
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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