Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N302_00956 | N302_07478 | A0A091EWM0 | A0A091FAM1 | Spermatogenesis-associated protein 5. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.935 |
N302_00956 | N302_14568 | A0A091EWM0 | A0A091EBF1 | Spermatogenesis-associated protein 5. | Protein YIPF. | 0.558 |
N302_00956 | N302_15520 | A0A091EWM0 | A0A091EIZ0 | Spermatogenesis-associated protein 5. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.880 |
N302_00956 | N302_16454 | A0A091EWM0 | A0A091F4Q9 | Spermatogenesis-associated protein 5. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.880 |
N302_01226 | N302_09190 | A0A091F9M0 | A0A091F9Y1 | Protein YIF1B. | Protein YIPF. | 0.593 |
N302_01226 | N302_14556 | A0A091F9M0 | A0A091EBD9 | Protein YIF1B. | Protein YIPF3. | 0.454 |
N302_01226 | N302_14568 | A0A091F9M0 | A0A091EBF1 | Protein YIF1B. | Protein YIPF. | 0.832 |
N302_01226 | N302_15003 | A0A091F9M0 | A0A091F3D3 | Protein YIF1B. | Immediate early response 3-interacting protein 1. | 0.627 |
N302_07478 | N302_00956 | A0A091FAM1 | A0A091EWM0 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Spermatogenesis-associated protein 5. | 0.935 |
N302_07478 | N302_14568 | A0A091FAM1 | A0A091EBF1 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Protein YIPF. | 0.533 |
N302_07478 | N302_14891 | A0A091FAM1 | A0A091E902 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. | 0.984 |
N302_07478 | N302_15520 | A0A091FAM1 | A0A091EIZ0 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.986 |
N302_07478 | N302_16249 | A0A091FAM1 | A0A091F535 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Spermatogenesis-associated protein 5-like 1. | 0.935 |
N302_07478 | N302_16454 | A0A091FAM1 | A0A091F4Q9 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.986 |
N302_09190 | N302_01226 | A0A091F9Y1 | A0A091F9M0 | Protein YIPF. | Protein YIF1B. | 0.593 |
N302_09190 | N302_14556 | A0A091F9Y1 | A0A091EBD9 | Protein YIPF. | Protein YIPF3. | 0.604 |
N302_09190 | N302_14568 | A0A091F9Y1 | A0A091EBF1 | Protein YIPF. | Protein YIPF. | 0.840 |
N302_14556 | N302_01226 | A0A091EBD9 | A0A091F9M0 | Protein YIPF3. | Protein YIF1B. | 0.454 |
N302_14556 | N302_09190 | A0A091EBD9 | A0A091F9Y1 | Protein YIPF3. | Protein YIPF. | 0.604 |
N302_14556 | N302_14568 | A0A091EBD9 | A0A091EBF1 | Protein YIPF3. | Protein YIPF. | 0.826 |
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