STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_14515TATA-box-binding protein. (304 aa)    
Predicted Functional Partners:
N302_00669
Transcription initiation factor IIB.
  
 0.982
N302_06432
Transcription factor IIIB 90 kDa subunit.
   
 0.978
N302_09397
Transcription initiation factor TFIID subunit 7.
    
 0.977
N302_06813
Transcription initiation factor TFIID subunit 12.
    
 0.977
N302_14501
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L.
    
 0.976
N302_05820
Transcription initiation factor TFIID subunit 9.
    
 0.976
N302_08046
Transcription initiation factor TFIID subunit 13.
   
 0.976
N302_07487
Transcription initiation factor TFIID subunit 2.
    
 0.976
N302_14730
Transcription initiation factor TFIID subunit 11.
   
 0.975
N302_00044
Transcription initiation factor IIA subunit 1.
   
 0.975
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.