STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09907Interferon regulatory factor. (325 aa)    
Predicted Functional Partners:
N302_08826
E3 ubiquitin-protein ligase Mdm2.
    
 0.944
N302_08198
Signal transducer and activator of transcription.
   
 0.856
N302_12939
CREB-binding protein.
    
 0.791
N302_04158
Interferon regulatory factor.
  
0.785
N302_04435
Myeloid differentiation primary response protein MyD88.
   
 0.780
N302_14776
Protein Mdm4.
    
 0.778
N302_13986
Histone deacetylase 1.
    
 0.773
N302_02784
Histone deacetylase 2.
    
 0.773
N302_08102
Chromodomain-helicase-DNA-binding protein 4.
    
 0.756
N302_13809
Autoimmune regulator.
    
 0.730
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.