STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_13574Hermansky-Pudlak syndrome 6 protein. (766 aa)    
Predicted Functional Partners:
N302_12516
Hermansky-Pudlak syndrome 3 protein.
   
 
 0.746
N302_13690
Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules.
    
 
 0.736
N302_01412
Hermansky-Pudlak syndrome 4 protein.
      
 0.592
N302_16252
Biogenesis of lysosome-related organelles complex 1 subunit 6.
      
 0.543
N302_10646
Dysbindin.
      
 0.513
N302_10365
Biogenesis of lysosome-related organelles complex 1 subunit 4.
      
 0.502
N302_02400
AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.
      
 0.495
N302_00748
Melanoma inhibitory activity protein 3.
      
 0.422
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.