STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_10884RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)    
Predicted Functional Partners:
N302_08597
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.999
N302_09186
Protein mago nashi 2.
   
 0.999
N302_09737
RNA-binding protein with serine-rich domain 1.
   
 0.988
N302_15288
Regulator of nonsense transcripts 3A.
    
 0.984
N302_13404
Serine/arginine-rich splicing factor 3.
   
 0.984
N302_05465
Regulator of nonsense transcripts 1.
    
 0.983
N302_15280
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.980
N302_15279
E3 SUMO-protein ligase RanBP2.
   
  0.980
N302_08408
Regulator of nonsense transcripts 2.
    
 0.972
N302_08409
Regulator of nonsense transcripts 2.
    
 0.972
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.