STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_00121Coiled-coil domain-containing protein 85C. (356 aa)    
Predicted Functional Partners:
N302_16248
DTW domain-containing protein 1.
      
 0.584
N302_04886
U3 small nucleolar ribonucleoprotein MPP10.
      
 0.545
N302_02358
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
      
 0.542
N302_11499
Putative rRNA-processing protein EBP2.
      
 0.473
N302_01828
Isthmin-2.
      
 0.445
N302_11355
Rho GTPase-activating protein 23.
    
 
 0.444
N302_00120
Cyclin-K; Belongs to the cyclin family.
    
 
 0.441
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.