STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_02211Mothers against decapentaplegic 6. (162 aa)    
Predicted Functional Partners:
N302_10315
E3 ubiquitin-protein ligase SMURF2.
    
 0.978
N302_11829
E3 ubiquitin-protein ligase SMURF1.
    
 0.978
N302_04979
Mothers against decapentaplegic homolog.
    
0.949
N302_12379
Mothers against decapentaplegic homolog.
    
0.948
N302_00872
Mothers against decapentaplegic homolog.
    
0.948
N302_06096
Mothers against decapentaplegic homolog.
    
0.948
N302_04980
Mothers against decapentaplegic 6.
  
  
 
0.912
N302_14328
Mothers against decapentaplegic homolog.
    
0.889
N302_15000
Mothers against decapentaplegic homolog.
    
0.889
N302_07770
Mothers against decapentaplegic 7.
  
  
 
0.844
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.