STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09540Ras association domain-containing protein 6. (319 aa)    
Predicted Functional Partners:
N302_00213
Serine/threonine-protein kinase 4.
    
 0.910
N302_13584
F-box/WD repeat-containing protein 1A.
    
 0.632
N302_08826
E3 ubiquitin-protein ligase Mdm2.
    
  0.551
N302_14776
Protein Mdm4.
    
  0.527
N302_09590
APC membrane recruitment protein 2.
    
 
 0.509
N302_05583
Long-chain-fatty-acid--CoA ligase ACSBG2.
   
  0.481
N302_08492
Long-chain-fatty-acid--CoA ligase ACSBG1.
   
  0.481
N302_14610
Long-chain-fatty-acid--CoA ligase 5.
    
  0.476
N302_09913
Long-chain-fatty-acid--CoA ligase 6.
    
  0.476
N302_01216
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.439
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.