STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_12425Zinc finger protein 143. (629 aa)    
Predicted Functional Partners:
N302_02759
Adenylate kinase 9.
    
  0.754
N302_08683
Transcription factor Sp1.
    
  0.678
N302_03489
POU domain protein.
    
  0.642
N302_10887
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.632
N302_05820
Transcription initiation factor TFIID subunit 9.
    
 0.624
N302_11116
POU domain protein.
    
  0.616
N302_08208
Histone-lysine N-methyltransferase EZH1.
   
 0.594
N302_15991
Histone-lysine N-methyltransferase EZH2.
   
 0.594
N302_16312
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 0.594
N302_00669
Transcription initiation factor IIB.
   
 0.588
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.