STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_05373Tripartite motif-containing protein 29. (158 aa)    
Predicted Functional Partners:
N302_05696
Putative ATP-dependent RNA helicase DDX58.
    
 0.778
N302_14393
Ubiquitin-40S ribosomal protein S27a.
    
  0.725
N302_07742
Polyubiquitin.
    
 0.696
N302_06684
Inducible T-cell costimulator.
    
 0.604
N302_14012
Protein argonaute-4; Belongs to the argonaute family.
    
 0.549
N302_14014
Protein argonaute-3.
    
 0.549
N302_11586
Interferon-induced helicase C domain-containing protein 1.
   
 0.545
N302_03241
Growth arrest-specific protein 7.
    
  0.520
N302_15338
E3 ubiquitin-protein ligase Midline-1.
    
 
0.507
N302_10860
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.501
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.