STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_15140Putative E3 SUMO-protein ligase RNF212. (204 aa)    
Predicted Functional Partners:
N302_00399
Meiotic recombination protein SPO11.
   
 
 0.627
N302_09367
Testis-expressed sequence 11 protein.
    
 
 0.621
N302_12034
MutS protein 4.
    
 
 0.541
N302_06543
Fanconi anemia group M protein.
      
 0.491
N302_07458
E3 SUMO-protein ligase NSE2.
    
 
 0.455
N302_04950
Uncharacterized protein.
    
 
 0.447
N302_13242
Werner syndrome ATP-dependent helicase.
    
 
 0.447
N302_03306
ATP-dependent DNA helicase Q5.
    
 
 0.447
N302_09783
Small ubiquitin-related modifier.
    
 
 0.419
N302_03323
Small ubiquitin-related modifier.
    
 
 0.419
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.