STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_05306THO complex subunit 3. (266 aa)    
Predicted Functional Partners:
N302_15797
THO complex subunit 7.
   
 0.998
N302_01009
THO complex subunit 1.
    
 0.997
N302_04627
THO complex subunit 5.
    
 0.997
N302_09255
THO complex subunit 4.
   
 0.953
N302_12779
Polymerase delta-interacting protein 3.
   
 0.897
N302_10809
Pre-mRNA cleavage complex 2 protein Pcf11.
     
 0.777
N302_05689
Nuclear cap-binding protein subunit 1.
    
 0.776
N302_08597
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.722
N302_10045
NTF2-related export protein 2.
   
 
 0.710
N302_05893
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
   
 
 0.676
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.