STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_15948Putative fidgetin-like 2. (118 aa)    
Predicted Functional Partners:
N302_05947
UBX domain-containing protein 7.
   
 0.973
N302_09695
IST1.
    
 0.882
N302_15151
Charged multivesicular body protein 3.
   
 0.857
N302_01456
Ubiquitin fusion degradation protein 1.
    
 0.824
N302_09093
Ubiquitin thioesterase OTU1.
   
 0.803
N302_09301
Nuclear protein localization protein 4.
    
 0.788
N302_09300
Fanconi anemia-associated protein of 100 kDa.
    
 0.788
N302_12439
Alpha-soluble NSF attachment protein.
    
 0.786
N302_02504
Beta-soluble NSF attachment protein.
    
 0.786
N302_05312
FAS-associated factor 2.
   
 0.762
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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