STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_00718Ribosomal protein S6 kinase delta-1. (1027 aa)    
Predicted Functional Partners:
N302_05593
Vesicle transport protein USE1.
    
 0.993
N302_06343
RAD50-interacting protein 1.
   
 0.993
N302_15070
Syntaxin-18.
    
 0.991
N302_11153
Centromere/kinetochore protein zw10.
    
 0.991
N302_03005
Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.
    
 0.778
N302_15359
Sorting nexin-10.
     
 0.766
N302_02746
Sorting nexin-3.
     
 0.766
N302_09371
Sorting nexin-12.
     
 0.766
N302_00541
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.746
N302_02346
Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.
   
 0.746
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.