STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_01262Chitinase domain-containing protein 1. (215 aa)    
Predicted Functional Partners:
N302_12968
WD repeat-containing protein 90.
    
 
 0.765
N302_00309
Double-strand-break repair protein rad21-like 1.
    
 
 0.701
N302_07496
Double-strand-break repair protein rad21.
    
 
 0.701
N302_09139
EF-hand domain-containing family member C2.
    
 
 0.688
N302_03955
Enkurin.
    
 
 0.688
N302_01983
EF-hand domain-containing protein 1.
    
 
 0.688
N302_15032
PACRG-like.
    
 
 0.671
N302_12296
EF-hand domain-containing family member B.
    
   0.671
N302_13652
Uncharacterized protein; Belongs to the heat shock protein 70 family.
    
   0.671
N302_15103
Hepatocyte growth factor activator.
    
 
 0.654
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.