STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_15374Nucleoporin-like 2. (386 aa)    
Predicted Functional Partners:
N302_13170
Nucleoporin GLE1.
    
 0.977
N302_14370
Exportin-1.
     
 0.941
N302_08684
Aladin.
    
 0.861
N302_10860
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.859
N302_13127
Nuclear pore complex protein Nup214.
    
 0.825
N302_16450
Nuclear pore complex protein Nup88.
     
 0.811
N302_00398
mRNA export factor.
    
 0.808
N302_13128
Nuclear pore complex protein Nup214.
    
 0.801
N302_11525
Nucleoporin NUP53.
    
 0.789
N302_09001
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.765
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.