STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_08873Ribosomal RNA processing protein 1 B. (711 aa)    
Predicted Functional Partners:
N302_10494
Ribosome biogenesis protein BRX1.
   
 
 0.998
N302_11499
Putative rRNA-processing protein EBP2.
   
 
 0.998
N302_11714
Ribosomal L1 domain-containing protein 1.
   
 
 0.998
N302_03432
Protein MAK16.
   
 
 0.994
N302_12215
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.994
N302_16209
Putative ribosome biogenesis protein RLP24.
   
 
 0.994
N302_02358
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
 
 0.994
N302_00695
Ribosome production factor 1.
   
 
 0.993
N302_06661
Ribosome biogenesis protein WDR12.
   
 
 0.991
N302_02772
Ribosome production factor 2.
   
 
 0.990
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.