STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_08001NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4. (69 aa)    
Predicted Functional Partners:
N302_08577
Uncharacterized protein.
   
 0.999
N302_03720
Uncharacterized protein.
   
 0.999
N302_11759
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10.
   
 0.999
N302_11728
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.999
N302_09794
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3.
   
 0.999
N302_12772
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Belongs to the complex I LYR family.
   
 0.999
N302_13442
Uncharacterized protein.
   
 0.999
N302_07143
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2.
   
 0.999
N302_14457
zf-CHCC domain-containing protein.
   
 0.999
N302_07800
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 0.999
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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