STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09077Protein SGT1. (568 aa)    
Predicted Functional Partners:
N302_16386
Pre-mRNA-processing-splicing factor 8.
    
 
 0.880
N302_13667
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.842
N302_13714
Protein TSSC4.
    
 
 0.758
N302_11390
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.716
N302_01745
E2F-associated phosphoprotein.
    
   0.688
N302_02722
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.678
N302_00659
Putative ATP-dependent DNA helicase HFM1.
   
 
 0.669
N302_12991
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 
 0.643
N302_05037
Suppressor of G2 allele of SKP1.
      
 0.499
N302_08790
RNA polymerase II-associated protein 3.
   
 
 0.485
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.