STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_16087Protein asteroid 1. (617 aa)    
Predicted Functional Partners:
N302_03004
DNA polymerase delta subunit 2.
    
 0.772
N302_06543
Fanconi anemia group M protein.
    
 0.742
N302_05705
Survival motor neuron protein.
    
 0.736
N302_07800
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 
 0.652
N302_07301
Uncharacterized protein.
   
   0.646
N302_12866
Small nuclear ribonucleoprotein F.
    
  0.645
N302_13043
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8.
   
 
 0.638
N302_14768
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.637
N302_03893
Uncharacterized protein.
   
   0.633
N302_01545
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
   0.633
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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