STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09997Protein-S-isoprenylcysteine O-methyltransferase. (189 aa)    
Predicted Functional Partners:
N302_10580
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
   
 0.972
N302_09215
Peptidase_M48 domain-containing protein.
   
 0.829
N302_02718
Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3.
    
 0.812
N302_08964
Peroxisomal NADH pyrophosphatase NUDT12.
   
 0.803
N302_08923
Riboflavin kinase.
     
 0.781
N302_14056
Nucleoside diphosphate-linked moiety X motif 13.
    
 0.736
N302_11709
Calcineurin-like phosphoesterase domain-containing protein 1.
    
  0.728
N302_05103
Bifunctional epoxide hydrolase 2.
  
 
  0.719
N302_12677
Sulfurtransferase.
    
  0.717
N302_12675
Sulfurtransferase.
    
  0.717
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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