Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N302_00902 | N302_04173 | A0A091EK00 | A0A091F953 | Vascular endothelial growth factor receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | 0.976 |
N302_00902 | N302_05234 | A0A091EK00 | A0A091EFN0 | Vascular endothelial growth factor receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.443 |
N302_00902 | N302_06681 | A0A091EK00 | A0A091EPR9 | Vascular endothelial growth factor receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Neuropilin-2. | 0.766 |
N302_04106 | N302_04173 | A0A091F4E3 | A0A091F953 | Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | 0.982 |
N302_04106 | N302_05234 | A0A091F4E3 | A0A091EFN0 | Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.641 |
N302_04106 | N302_06681 | A0A091F4E3 | A0A091EPR9 | Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Neuropilin-2. | 0.679 |
N302_04131 | N302_04173 | A0A091F721 | A0A091F953 | Platelet-derived growth factor receptor-like. | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | 0.698 |
N302_04131 | N302_06681 | A0A091F721 | A0A091EPR9 | Platelet-derived growth factor receptor-like. | Neuropilin-2. | 0.650 |
N302_04173 | N302_00902 | A0A091F953 | A0A091EK00 | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | Vascular endothelial growth factor receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.976 |
N302_04173 | N302_04106 | A0A091F953 | A0A091F4E3 | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.982 |
N302_04173 | N302_04131 | A0A091F953 | A0A091F721 | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | Platelet-derived growth factor receptor-like. | 0.698 |
N302_04173 | N302_05234 | A0A091F953 | A0A091EFN0 | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.996 |
N302_04173 | N302_06681 | A0A091F953 | A0A091EPR9 | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | Neuropilin-2. | 0.593 |
N302_04173 | N302_09448 | A0A091F953 | A0A091EXV6 | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | Vascular endothelial growth factor receptor kdr-like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.966 |
N302_04173 | N302_11978 | A0A091F953 | A0A091E6H9 | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | Semaphorin-3C; Belongs to the semaphorin family. | 0.444 |
N302_05234 | N302_00902 | A0A091EFN0 | A0A091EK00 | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.443 |
N302_05234 | N302_04106 | A0A091EFN0 | A0A091F4E3 | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.641 |
N302_05234 | N302_04173 | A0A091EFN0 | A0A091F953 | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | 0.996 |
N302_05234 | N302_06681 | A0A091EFN0 | A0A091EPR9 | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Neuropilin-2. | 0.808 |
N302_05234 | N302_09448 | A0A091EFN0 | A0A091EXV6 | Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Vascular endothelial growth factor receptor kdr-like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.446 |
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