STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09148Putative ubiquitin carboxyl-terminal hydrolase FAF-X; Belongs to the peptidase C19 family. (2552 aa)    
Predicted Functional Partners:
N302_01934
Intersectin-2.
   
 
  0.972
N302_05918
E3 ubiquitin-protein ligase TRIP12.
   
 
 0.876
N302_01558
DNA damage-binding protein 2.
    
 0.860
N302_04951
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
    
 0.770
N302_08131
Peroxisomal targeting signal 1 receptor.
    
 0.742
N302_07742
Polyubiquitin.
    
  0.734
N302_02146
Induced myeloid leukemia cell differentiation protein Mcl-1.
    
 
 0.723
N302_07304
Mothers against decapentaplegic homolog.
    
 0.718
N302_07758
Mothers against decapentaplegic homolog.
    
 0.718
N302_03722
PEX5-related protein.
    
 0.709
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.