STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_16096ELL-associated factor 1. (224 aa)    
Predicted Functional Partners:
N302_03616
RNA polymerase II elongation factor ELL.
    
 0.965
N302_02353
ELL-associated factor 2.
  
 
0.936
N302_06101
AF4/FMR2 family member 1.
    
 0.922
N302_05388
AF4/FMR2 family member 4.
    
 0.918
N302_15919
Protein AF-9.
   
 0.918
N302_06122
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.916
N302_01273
Transcription elongation factor SPT5.
    
 0.873
N302_05977
DNA-directed RNA polymerase II subunit RPB4.
    
  0.865
N302_03743
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
  0.865
N302_08271
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.865
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.