STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_11851Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe. (230 aa)    
Predicted Functional Partners:
N302_00540
Neurogenic locus notch protein 2.
    
 0.857
N302_13074
Neurogenic locus notch protein 1.
    
 0.837
N302_08354
Negative elongation factor B.
   
 0.835
N302_12686
Beta-1,3-N-acetylglucosaminyltransferase manic fringe.
  
  
 
0.812
N302_09244
Beta-1,3-N-acetylglucosaminyltransferase radical fringe.
  
  
 
0.811
N302_03743
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
  0.784
N302_06122
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.723
N302_13073
Neurogenic locus notch protein 1.
    
 0.718
N302_12704
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.714
N302_08271
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.703
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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