STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_12472Short stature homeobox protein 2. (71 aa)    
Predicted Functional Partners:
N302_15042
LIM domain-binding protein 2.
    
 0.617
N302_07281
MADS-box domain-containing protein.
    
 0.575
N302_11244
LIM/homeobox protein Lhx4.
    
 0.504
N302_04910
BHLH domain-containing protein.
    
  0.467
N302_02412
Transcription factor E2-alpha.
    
  0.467
N302_00357
Transcription factor GATA-5.
    
 0.448
N302_10184
GATA-binding factor 2.
    
 0.448
N302_08415
GATA-binding factor 3.
    
 0.448
N302_07502
Zinc finger transcription factor Trps1.
    
 0.448
N302_12418
Achaete-scute 3.
    
 0.432
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.