STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_08152ORM1-like protein; Negative regulator of sphingolipid synthesis. (153 aa)    
Predicted Functional Partners:
N302_10324
Serine palmitoyltransferase 1.
    
 
 0.901
N302_01744
Serine palmitoyltransferase small subunit A.
    
 
 0.757
N302_01828
Isthmin-2.
    
 
 0.726
N302_14348
Serine palmitoyltransferase 3.
    
 
 0.726
N302_14347
Isthmin-1.
    
 
 0.726
N302_12697
Aminotran_1_2 domain-containing protein.
    
 
 0.674
N302_10116
5-aminolevulinate synthase.
    
 
 0.674
N302_16041
Phosphatidylinositide phosphatase SAC1.
    
 
 0.494
N302_07699
Ribosomal protein S6 kinase beta-1; Belongs to the protein kinase superfamily.
   
 
 0.401
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.