STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_12590Protein shisa-4. (68 aa)    
Predicted Functional Partners:
N302_13707
Nucleosome assembly protein 1-like 4; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.734
N302_08855
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.734
N302_01277
Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.673
N302_01278
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.672
N302_04218
Histone H2A; Belongs to the histone H2A family.
    
 
 0.669
N302_02066
Histone H2A.V; Belongs to the histone H2A family.
    
 
 0.669
N302_14515
TATA-box-binding protein.
    
 
 0.654
N302_06488
TATA box-binding protein-like 2.
    
 
 0.654
N302_02880
TATA box-binding protein-like 1.
    
 
 0.643
N302_14633
Histone H2B type 1-A; Belongs to the histone H2B family.
    
   0.634
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.