STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_12757Cold shock domain-containing protein C2. (162 aa)    
Predicted Functional Partners:
N302_11202
Putative ATP-dependent RNA helicase DDX6.
  
 
 0.703
N302_12165
Uncharacterized protein.
  
 
 0.682
N302_12866
Small nuclear ribonucleoprotein F.
    
  0.672
N302_14274
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.670
N302_15502
Small nuclear ribonucleoprotein Sm D3.
   
 0.659
N302_09330
Small nuclear ribonucleoprotein G.
    
  0.658
N302_01937
Uncharacterized protein.
  
   0.649
N302_14768
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.621
N302_12017
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.617
N302_08515
Heterogeneous nuclear ribonucleoprotein U.
    
 0.595
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.