STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_04907Retinal dehydrogenase 2; Belongs to the aldehyde dehydrogenase family. (447 aa)    
Predicted Functional Partners:
N302_13511
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
  
 
 0.957
N302_04212
Alcohol dehydrogenase 1.
 
 0.947
N302_09800
Aldehyde oxidase.
   
 
 0.945
N302_13376
Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.943
N302_09967
Short-chain dehydrogenase/reductase 3.
  
 0.943
N302_01682
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.941
N302_06917
Beta,beta-carotene 15,15'-monooxygenase.
  
 
 0.938
N302_11843
Cytochrome P450 3A24.
  
 
 0.934
N302_11842
Cytochrome P450 3A9; Belongs to the cytochrome P450 family.
  
 
 0.932
N302_08447
Cytochrome P450 1A4; Belongs to the cytochrome P450 family.
  
 
 0.928
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.