STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_11131Histone H4 transcription factor. (345 aa)    
Predicted Functional Partners:
N302_00102
Homeobox protein goosecoid.
    
   0.939
N302_14759
Transcription initiation factor TFIID subunit 8.
   
    0.601
N302_01629
Leucine-rich repeat-containing protein 57.
   
    0.600
N302_04770
Dynactin subunit 2.
      
 0.502
N302_14023
U7 snRNA-associated Sm-like LSm10.
      
 0.495
N302_08861
Transcription factor E2F7.
      
 0.469
N302_15125
Uncharacterized protein.
      
 0.400
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.