STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_04237Methylcytosine dioxygenase TET2. (1467 aa)    
Predicted Functional Partners:
N302_14478
AT-rich interactive domain-containing protein 4B.
   
 
 0.677
N302_06474
AT-rich interactive domain-containing protein 4A.
   
 
 0.660
N302_07150
CXXC-type zinc finger protein 5.
     
 0.630
N302_03759
Segment polarity protein dishevelled DVL-3.
    
 0.560
N302_14269
Segment polarity protein dishevelled DVL-1.
    
 0.560
N302_09382
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.
   
 
 0.528
N302_07003
Purine nucleoside phosphorylase.
     
 0.467
N302_00281
DNA (Cytosine-5)-methyltransferase 3B.
      
 0.448
N302_04850
DNA (Cytosine-5)-methyltransferase 1.
      
 0.426
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.