STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_04296Low-density lipoprotein receptor-related protein 2. (634 aa)    
Predicted Functional Partners:
N302_04738
Low-density lipoprotein receptor-related protein 1.
 
   
 0.944
N302_12118
Sonic hedgehog protein.
     
 0.861
N302_11632
Indian hedgehog protein.
     
 0.855
N302_11468
Protein patched 1.
     
 0.841
N302_15101
Alpha-2-macroglobulin receptor-associated protein.
    
 0.816
N302_13921
Low density lipoprotein receptor adapter protein 1.
    
 0.814
N302_05527
Basement membrane-specific heparan sulfate proteoglycan core protein.
    
 0.780
N302_11268
Ankyrin repeat family A protein 2.
    
 
 0.780
N302_11535
Protein patched 1.
     
 0.779
N302_09752
Protein patched 1.
     
 0.779
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.